To determine the effects of sanitation on yield and incidence of Botrytis fruit rot (Botrytis cinerea) in annual strawberry, replicated experiments were conducted during the 1995-96, 1996-97, and 1998-99 seasons. Leaf sanitation (removal of senescent and necrotic leaves) and fruit sanitation (removal of unmarketable fruit from alleys between beds) were compared to a standard fungicide control program (weekly applications of captan plus four bloom applications of iprodione) and combined sanitation and fungicide treatments. Leaf sanitation reduced Botrytis fruit rot incidence from 12.6 to 8.2% over the entire 1996-97 season, and from 17.6 to 11.8% during the latter half of the 1998-99 season, compared to untreated controls. However, sanitation did not increase marketable yield. Supplementing fungicides with leaf sanitation or leaf and fruit sanitation did not improve disease control and frequently reduced yield. Fruit sanitation had no significant effect on Botrytis incidence or yield. Losses to Botrytis fruit rot in the sanitation treatments were significantly higher (P ≤ 0.05) than in the fungicide treatments each season; marketable yields were significantly lower in 1996-97 and 1998-99. Under Florida conditions, fungicides control Botrytis fruit more effectively and economically than does sanitation.