Prime Editing for Inherited Retinal Diseases
Journal: 2021/December - Front Genome Ed
Abstract:
Inherited retinal diseases (IRDs) are chronic, hereditary disorders that lead to progressive degeneration of the retina. Disease etiology originates from a genetic mutation-inherited or de novo-with a majority of IRDs resulting from point mutations. Given the plethora of IRDs, to date, mutations that cause these dystrophies have been found in approximately 280 genes. However, there is currently only one FDA-approved gene augmentation therapy, Luxturna (voretigene neparvovec-rzyl), available to patients with RPE65-mediated retinitis pigmentosa (RP). Although clinical trials for other genes are underway, these techniques typically involve gene augmentation rather than genome surgery. While gene augmentation therapy delivers a healthy copy of DNA to the cells of the retina, genome surgery uses clustered regularly interspaced short palindromic repeats (CRISPR)-based technology to correct a specific genetic mutation within the endogenous genome sequence. A new technique known as prime editing (PE) applies a CRISPR-based technology that possesses the potential to correct all twelve possible transition and transversion mutations as well as small insertions and deletions. EDIT-101, a CRISPR-based therapy that is currently in clinical trials, uses double-strand breaks and nonhomologous end joining to remove the IVS26 mutation in the CEP290 gene. Preferably, PE does not cause double-strand breaks nor does it require any donor DNA repair template, highlighting its unparalleled efficiency. Instead, PE uses reverse transcriptase and Cas9 nickase to repair mutations in the genome. While this technique is still developing, with several challenges yet to be addressed, it offers promising implications for the future of IRD treatment.
Keywords: CRISPR/Cas9 systems; Ophthalmology; adeno-associated viral (AAV) vectors; gene editing; inherited retinal diseases (IRD); prime editing; retinal degeneration.
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Prime Editing for Inherited Retinal Diseases

Department of Ophthalmology, Columbia University Irving Medical Center, New York, NY, United States,
Department of Biomedical Engineering, Columbia University, New York, NY, United States,
College of Arts and Sciences, Syracuse University, New York, NY, United States,
Edited by:Krishanu Saha, University of Wisconsin-Madison, United States
Reviewed by:Marta Olejniczak, Institute of Bioorganic Chemistry (PAS), Poland

Yueh-Chiang Hu, Cincinnati Children’s Hospital Medical Center, United States

*Correspondence: Peter M. J. Quinn, ude.aibmuloc.cmuc@8312qp
This article was submitted to Genome Engineering and Neurologic Disorders, a section of the journal Frontiers in Genome Editing
Edited by:Krishanu Saha, University of Wisconsin-Madison, United StatesReviewed by:Marta Olejniczak, Institute of Bioorganic Chemistry (PAS), Poland

Yueh-Chiang Hu, Cincinnati Children’s Hospital Medical Center, United States

This article was submitted to Genome Engineering and Neurologic Disorders, a section of the journal Frontiers in Genome Editing
Received 2021 Sep 13; Accepted 2021 Nov 5.
This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

Abstract

Inherited retinal diseases (IRDs) are chronic, hereditary disorders that lead to progressive degeneration of the retina. Disease etiology originates from a genetic mutation—inherited or de novo—with a majority of IRDs resulting from point mutations. Given the plethora of IRDs, to date, mutations that cause these dystrophies have been found in approximately 280 genes. However, there is currently only one FDA-approved gene augmentation therapy, Luxturna (voretigene neparvovec-rzyl), available to patients with RPE65-mediated retinitis pigmentosa (RP). Although clinical trials for other genes are underway, these techniques typically involve gene augmentation rather than genome surgery. While gene augmentation therapy delivers a healthy copy of DNA to the cells of the retina, genome surgery uses clustered regularly interspaced short palindromic repeats (CRISPR)-based technology to correct a specific genetic mutation within the endogenous genome sequence. A new technique known as prime editing (PE) applies a CRISPR-based technology that possesses the potential to correct all twelve possible transition and transversion mutations as well as small insertions and deletions. EDIT-101, a CRISPR-based therapy that is currently in clinical trials, uses double-strand breaks and nonhomologous end joining to remove the IVS26 mutation in the CEP290 gene. Preferably, PE does not cause double-strand breaks nor does it require any donor DNA repair template, highlighting its unparalleled efficiency. Instead, PE uses reverse transcriptase and Cas9 nickase to repair mutations in the genome. While this technique is still developing, with several challenges yet to be addressed, it offers promising implications for the future of IRD treatment.

Keywords: Ophthalmology, prime editing, inherited retinal diseases (IRD), gene editing, retinal degeneration, adeno-associated viral (AAV) vectors, CRISPR/Cas9 systems
Abstract

Acknowledgments

The authors would like to thank Dr. Stephen H. Tsang and Dr. C. Henrique Alves for their critical reading of the manuscript. Further, we thank the Jonas Children’s Vision Care (JCVC) team for their support and comradery.

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