Replicon System for Lassa Virus
Abstract
Lassa virus is endemic to West Africa and causes hemorrhagic fever in humans. To facilitate the functional analysis of this virus, a replicon system was developed based on Lassa virus strain AV. Genomic and antigenomic minigenomes (MG) were constructed consisting of the intergenic region of S RNA and a reporter gene (Renilla luciferase) in antisense orientation, flanked by the 5′ and 3′ untranslated regions of S RNA. MGs were expressed under the control of the T7 promoter. Nucleoprotein (NP), L protein, and Z protein were expressed from plasmids containing the T7 promoter and internal ribosomal entry site. Transfection of cells stably expressing T7 RNA polymerase (BSR T7/5) with MG in the form of DNA or RNA and plasmids for the expression of NP and L protein resulted in high levels of Renilla luciferase expression. The replicon system was optimized with respect to the ratio of the transfected constructs and by modifying the 5′ end of the MG. Maximum activity was observed 24 to 36 h after transfection with a signal-to-noise ratio of 2 to 3 log units. Northern blot analysis provided evidence for replication and transcription of the MG. Z protein downregulated replicon activity close to background levels. Treatment with ribavirin and alpha interferon inhibited replicon activity, suggesting that both act on the level of RNA replication, transcription, or ribonucleoprotein assembly. In conclusion, this study describes the first replicon system for a highly pathogenic arenavirus. It is a tool for investigating the mechanisms of replication and transcription of Lassa virus and may facilitate the testing of antivirals outside a biosafety level 4 laboratory.
Lassa virus is a member of the family of Arenaviridae. This family comprises further human pathogens such as Junin virus, Guanarito virus, Machupo virus, and the prototype arenavirus lymphocytic choriomeningitis virus (LCMV).
The natural hosts of Lassa virus are rodents of the genus Mastomys (43). Transmission of the virus from its reservoir to humans causes Lassa fever, an acute febrile illness associated with bleeding. The disease is endemic to the West African countries of Sierra Leone, Guinea, Liberia, and Nigeria (5, 9, 42, 44), but the virus is probably endemic to larger areas of West Africa (24). Lassa fever is characterized initially by flu-like and gastrointestinal symptoms. Bleeding, organ failure, and shock may occur in the late phase of the disease (36). Death occurs after a mean period of 2 weeks after the onset of illness. The virus can also be transmitted from human to human, giving rise to nosocomial Lassa fever epidemics with fatality rates of up to 65% (17). There is no vaccination available for use in humans. The only drug with a proven therapeutic efficacy in humans with Lassa fever is the broad-spectrum nucleoside analogue ribavirin (35). However, the drug is only effective if given early during the course of disease. Cases of Lassa fever recently imported into Europe show that even state-of-the-art intensive care cannot prevent a fatal outcome (54). Due to the high pathogenicity of Lassa virus and the limitations to the prevention or treatment of infections, the virus is classified as a level 4 pathogen and must be handled under biosafety level 4 (BSL-4) conditions.
Arenaviruses belong to the segmented negative-strand RNA viruses. The genome of Lassa virus, like that of other arenaviruses, consists of two single-stranded RNA segments (33). The small (S) segment is 3.4 kb in length, and the large (L) segment is 7 kb in length. Each segment contains two genes, one in sense orientation and one in antisense orientation, a coding strategy that is called ambisense (4). The S RNA encodes the 75-kDa glycoprotein precursor (GPC) and the 63-kDa nucleoprotein (NP). GPC is posttranslationally cleaved into GP1 and GP2 (8). The L RNA encodes the 11-kDa Z protein, which binds zinc and acts as a matrix protein (47, 55), and the 200-kDa L protein, which is likely to function as the viral polymerase (34, 58). The genes are separated on each RNA segment by an intergenic region (IGR) that predictably folds into a stable secondary structure.
The terminal 19 nucleotides at the 3′ and 5′ ends of the RNA segments are complementary to each other and are highly conserved among all arenaviruses. The termini are essential for replication and transcription (46) and are believed to function as a binding site of the viral polymerase. Replication and transcription of the genome occur in the cytoplasm of an infected cell and both take place within ribonucleoprotein complexes (20). During genome replication, a full-length copy of genomic S and L RNAs is synthesized, yielding the corresponding antigenomic S and L RNAs. Due to the ambisense coding strategy, both genomic and antigenomic RNA serve as templates for the transcription of viral mRNA. The transcripts contain a cap but are not polyadenylated. They terminate within the IGR, suggesting that this element plays a role in transcription termination (37).
Recently, reverse genetics techniques were established for LCMV and Tacaribe virus (31, 32). While these minireplicon systems are still restricted in terms of rescue of genetically modified infectious viruses, they opened the possibility of studying the function of proteins and regulatory elements involved in RNA replication and transcription (30, 46, 48). In particular, the function of Z protein has been studied in detail (12, 13, 27, 47). A sophisticated selection strategy made it possible to generate the first infectious recombinant LCMV with the GPC gene replaced by the glycoprotein gene of vesicular stomatitis virus (49). A reverse genetics system for a highly pathogenic arenavirus like Lassa virus has not yet been published.
In this article, we report the establishment of a minireplicon system for Lassa virus. The system is analogous to the minireplicon systems published for LCMV and Tacaribe virus in gross terms, but it differs in several technical aspects from the other systems. It is also demonstrated that the system is suitable to test antivirals against Lassa virus outside BSL-4 laboratories.
Acknowledgments
We thank Ursula Buchholz and Karl-Klaus Conzelmann for providing vector pX12ΔT and BSR T7/5 cells, Gerd Sutter for providing MVA-T7, Simon Vieth for help with sequencing the S RNA termini of Lassa virus AV, Stephan Becker and Friedemann Weber for many helpful discussions, and Herbert Schmitz for continuous support of the work.
This work was supported by grant E/B41G/1G309/1A403 from the Bundesamt für Wehrtechnik und Beschaffung. The Bernhard-Nocht-Institut is supported by the Bundesministerium für Gesundheit and the Freie und Hansestadt Hamburg.
REFERENCES
References
- 1. Andrei, G., and EDe Clercq. 1990. Inhibitory effect of selected antiviral compounds on arenavirus replication in vitro. Antivir. Res.14:287-299. [[PubMed][Google Scholar]
- 2. Asper, M., T. Sternsdorf, M. Hass, C. Drosten, A. Rhode, H. Schmitz, and S. Günther. 2004. Inhibition of different Lassa virus strains by alpha and gamma interferons and comparison with a less pathogenic arenavirus. J. Virol.78:3162-3169.
- 3. Auperin, D. D., D. R. Sasso, and J. B. McCormick. 1986. Nucleotide sequence of the glycoprotein gene and intergenic region of the Lassa virus S genome RNA. Virology154:155-167. [[PubMed]
- 4. Auperin, D. D., V. Romanowski, M. Galinski, and D. H. Bishop. 1984. Sequencing studies of pichinde arenavirus S RNA indicate a novel coding strategy, an ambisense viral S RNA. J. Virol.52:897-904.
- 5. Bausch, D. G., A. H. Demby, M. Coulibaly, J. Kanu, A. Goba, A. Bah, N. Conde, H. L. Wurtzel, K. F. Cavallaro, E. Lloyd, F. B. Baldet, S. D. Cisse, D. Fofona, I. K. Savane, R. T. Tolno, B. Mahy, K. D. Wagoner, T. G. Ksiazek, C. J. Peters, and P. E. Rollin. 2001. Lassa fever in Guinea. I. Epidemiology of human disease and clinical observations. Vector Borne Zoonotic Dis.1:269-281. [[PubMed]
- 6. Biebricher, C. K., and R. Luce. 1996. Template-free generation of RNA species that replicate with bacteriophage T7 RNA polymerase. EMBO J.15:3458-3465.
- 7. Buchholz, U. J., S. Finke, and K. K. Conzelmann. 1999. Generation of bovine respiratory syncytial virus (BRSV) from cDNA: BRSV NS2 is not essential for virus replication in tissue culture, and the human RSV leader region acts as a functional BRSV genome promoter. J. Virol.73:251-259.
- 8. Buchmeier, M. J., P. J. Southern, B. S. Parekh, M. K. Wooddell, and M. B. Oldstone. 1987. Site-specific antibodies define a cleavage site conserved among arenavirus GP-C glycoproteins. J. Virol.61:982-985.
- 9. Carey, D. E., G. E. Kemp, H. A. White, L. Pinneo, R. F. Addy, A. L. Fom, G. Stroh, J. Casals, and B. E. Henderson. 1972. Lassa fever. Epidemiological aspects of the 1970 epidemic, Jos, Nigeria. Trans. R. Soc. Trop. Med. Hyg.66:402-408. [[PubMed]
- 10. Cazenave, C., and O. C. Uhlenbeck. 1994. RNA template-directed RNA synthesis by T7 RNA polymerase. Proc. Natl. Acad. Sci. USA91:6972-6976.
- 11. Conzelmann, KK. 1998. Nonsegmented negative-strand RNA viruses: genetics and manipulation of viral genomes. Annu. Rev. Genet.32:123-162. [[PubMed][Google Scholar]
- 12. Cornu, T. I., and J. C. de la Torre. 2001. RING finger Z protein of lymphocytic choriomeningitis virus (LCMV) inhibits transcription and RNA replication of an LCMV S-segment minigenome. J. Virol.75:9415-9426.
- 13. Cornu, T. I., and J. C. de la Torre. 2002. Characterization of the arenavirus RING finger Z protein regions required for Z-mediated inhibition of viral RNA synthesis. J. Virol.76:6678-6688.
- 14. Crotty, S., C. E. Cameron, and R. Andino. 2001. RNA virus error catastrophe: direct molecular test by using ribavirin. Proc. Natl. Acad. Sci. USA98:6895-6900.
- 15. Crotty, S., D. Maag, J. J. Arnold, W. Zhong, J. Y. Lau, Z. Hong, R. Andino, and C. E. Cameron. 2000. The broad-spectrum antiviral ribonucleoside ribavirin is an RNA virus mutagen. Nat. Med.6:1375-1379. [[PubMed]
- 16. Elroy-Stein, O., and BMoss. 1990. Cytoplasmic expression system based on constitutive synthesis of bacteriophage T7 RNA polymerase in mammalian cells. Proc. Natl. Acad. Sci. USA87:6743-6747. [Google Scholar]
- 17. Fisher-Hoch, S. P., O. Tomori, A. Nasidi, G. I. Perez-Oronoz, Y. Fakile, L. Hutwagner, and J. B. McCormick. 1995. Review of cases of nosocomial Lassa fever in Nigeria: the high price of poor medical practice. BMJ311:857-859.
- 18. Fuerst, T. R., and B. Moss. 1989. Structure and stability of mRNA synthesized by vaccinia virus-encoded bacteriophage T7 RNA polymerase in mammalian cells. Importance of the 5′ untranslated leader. J. Mol. Biol.206:333-348. [[PubMed]
- 19. Fuerst, T. R., E. G. Niles, F. W. Studier, and B. Moss. 1986. Eukaryotic transient-expression system based on recombinant vaccinia virus that synthesizes bacteriophage T7 RNA polymerase. Proc. Natl. Acad. Sci. USA83:8122-8126.
- 20. Fuller-Pace, F. V., and P. J. Southern. 1989. Detection of virus-specific RNA-dependent RNA polymerase activity in extracts from cells infected with lymphocytic choriomeningitis virus: in vitro synthesis of full-length viral RNA species. J. Virol.63:1938-1944.
- 21. Garcin, D., and DKolakofsky. 1990. A novel mechanism for the initiation of Tacaribe arenavirus genome replication. J. Virol.64:6196-6203. [Google Scholar]
- 22. Goswami, B. B., E. Borek, O. K. Sharma, J. Fujitaki, and R. A. Smith. 1979. The broad spectrum antiviral agent ribavirin inhibits capping of mRNA. Biochem. Biophys. Res. Commun.89:830-836. [[PubMed]
- 23. Günther, S., O. Kühle, D. Rehder, G. N. Odaibo, D. O. Olaleye, P. Emmerich, J. ter Meulen, and H. Schmitz. 2001. Antibodies to Lassa virus Z protein and nucleoprotein co-occur in human sera from Lassa fever endemic regions. Med. Microbiol. Immunol. (Berlin)189:225-229. [[PubMed]
- 24. Günther, S., P. Emmerich, T. Laue, O. Kühle, M. Asper, A. Jung, T. Grewing, J. ter Meulen, and H. Schmitz. 2000. Imported Lassa fever in Germany: molecular characterization of a new Lassa virus strain. Emerg. Infect. Dis.6:466-476.
- 25. Günther, S., M. Asper, C. Röser, L. K. S. Luna, C. Drosten, B. Becker-Ziaja, P. Borowski, H.-M. Chen, and R. S. Hosmane. 2004. Application of real-time PCR for testing antiviral compounds against Lassa virus, SARS coronavirus, and Ebola virus in vitro. Antivir. Res.63:209-215.
- 26. Imburgio, D., M. Rong, K. Ma, and W. T. McAllister. 2000. Studies of promoter recognition and start site selection by T7 RNA polymerase using a comprehensive collection of promoter variants. Biochemistry39:10419-10430. [[PubMed]
- 27. Jacamo, R., N. Lopez, M. Wilda, and M. T. Franze-Fernandez. 2003. Tacaribe virus Z protein interacts with the L polymerase protein to inhibit viral RNA synthesis. J. Virol.77:10383-10393.
- 28. Kao, C., M. Zheng, and S. Rudisser. 1999. A simple and efficient method to reduce nontemplated nucleotide addition at the 3 terminus of RNAs transcribed by T7 RNA polymerase. RNA5:1268-1272.
- 29. Katz, E., E. Margalith, and B. Winer. 1976. Inhibition of vaccinia virus growth by the nucleoside analogue 1-beta-D-ribofuranosyl-1,2,4-triazole-3-carboxamide (virazole, ribavirin). J. Gen. Virol.32:327-330. [[PubMed]
- 30. Lee, K. J., M. Perez, D. D. Pinschewer, and J. C. de la Torre. 2002. Identification of the lymphocytic choriomeningitis virus (LCMV) proteins required to rescue LCMV RNA analogs into LCMV-like particles. J. Virol.76:6393-6397.
- 31. Lee, K. J., I. S. Novella, M. N. Teng, M. B. Oldstone, and J. C. de La Torre. 2000. NP and L proteins of lymphocytic choriomeningitis virus (LCMV) are sufficient for efficient transcription and replication of LCMV genomic RNA analogs. J. Virol.74:3470-3477.
- 32. Lopez, N., R. Jacamo, and M. T. Franze-Fernandez. 2001. Transcription and RNA replication of tacaribe virus genome and antigenome analogs require N and L proteins: Z protein is an inhibitor of these processes. J. Virol.75:12241-12251.
- 33. Lukashevich, I. S., T. A. Stelmakh, V. P. Golubev, E. P. Stchesljenok, and N. N. Lemeshko. 1984. Ribonucleic acids of Machupo and Lassa viruses. Arch. Virol.79:189-203. [[PubMed]
- 34. Lukashevich, I. S., M. Djavani, K. Shapiro, A. Sanchez, E. Ravkov, S. T. Nichol, and M. S. Salvato. 1997. The Lassa fever virus L gene: nucleotide sequence, comparison, and precipitation of a predicted 250 kDa protein with monospecific antiserum. J. Gen. Virol.78:547-551.
- 35. McCormick, J. B., I. J. King, P. A. Webb, C. L. Scribner, R. B. Craven, K. M. Johnson, L. H. Elliott, and R. Belmont-Williams. 1986. Lassa fever. Effective therapy with ribavirin. N. Engl. J. Med.314:20-26. [[PubMed]
- 36. McCormick, J. B., I. J. King, P. A. Webb, K. M. Johnson, R. O'Sullivan, E. S. Smith, S. Trippel, and T. C. Tong. 1987. A case-control study of the clinical diagnosis and course of Lassa fever. J. Infect. Dis.155:445-455. [[PubMed]
- 37. Meyer, B. J., and P. J. Southern. 1993. Concurrent sequence analysis of 5′ and 3′ RNA termini by intramolecular circularization reveals 5′ nontemplated bases and 3′ terminal heterogeneity for lymphocytic choriomeningitis virus mRNAs. J. Virol.67:2621-2627.
- 38. Meyer, B. J., and P. J. Southern. 1994. Sequence heterogeneity in the termini of lymphocytic choriomeningitis virus genomic and antigenomic RNAs. J. Virol.68:7659-7664.
- 39. Meyer, B. J., and P. J. Southern. 1997. A novel type of defective viral genome suggests a unique strategy to establish and maintain persistent lymphocytic choriomeningitis virus infections. J. Virol.71:6757-6764.
- 40. Meyer, H., G. Sutter, and A. Mayr. 1991. Mapping of deletions in the genome of the highly attenuated vaccinia virus MVA and their influence on virulence. J. Gen. Virol.72:1031-1038. [[PubMed]
- 41. Milligan, J. F., D. R. Groebe, G. W. Witherell, and O. C. Uhlenbeck. 1987. Oligoribonucleotide synthesis using T7 RNA polymerase and synthetic DNA templates. Nucleic Acids Res.15:8783-8798.
- 42. Monath, T. P., M. Maher, J. Casals, R. E. Kissling, and A. Cacciapuoti. 1974. Lassa fever in the Eastern Province of Sierra Leone, 1970-1972. II. Clinical observations and virological studies on selected hospital cases. Am. J. Trop. Med. Hyg.23:1140-1149. [[PubMed]
- 43. Monath, T. P., V. F. Newhouse, G. E. Kemp, H. W. Setzer, and A. Cacciapuoti. 1974. Lassa virus isolation from Mastomys natalensis rodents during an epidemic in Sierra Leone. Science185:263-265. [[PubMed]
- 44. Monath, T. P., P. E. Mertens, R. Patton, C. R. Moser, J. J. Baum, L. Pinneo, G. W. Gary, and R. E. Kissling. 1973. A hospital epidemic of Lassa fever in Zorzor, Liberia, March-April 1972. Am. J. Trop. Med. Hyg.22:773-779. [[PubMed]
- 45. Mühlberger, E., B. Lotfering, H. D. Klenk, and S. Becker. 1998. Three of the four nucleocapsid proteins of Marburg virus, NP, VP35, and L, are sufficient to mediate replication and transcription of Marburg virus-specific monocistronic minigenomes. J. Virol.72:8756-8764.
- 46. Perez, M., and J. C. de la Torre. 2003. Characterization of the genomic promoter of the prototypic arenavirus lymphocytic choriomeningitis virus. J. Virol.77:1184-1194.
- 47. Perez, M., R. C. Craven, and J. C. de la Torre. 2003. The small RING finger protein Z drives arenavirus budding: implications for antiviral strategies. Proc. Natl. Acad. Sci. USA100:12978-12983.
- 48. Pinschewer, D. D., M. Perez, and J. C. de la Torre. 2003. Role of the virus nucleoprotein in the regulation of lymphocytic choriomeningitis virus transcription and RNA replication. J. Virol.77:3882-3887.
- 49. Pinschewer, D. D., M. Perez, A. B. Sanchez, and J. C. de la Torre. 2003. Recombinant lymphocytic choriomeningitis virus expressing vesicular stomatitis virus glycoprotein. Proc. Natl. Acad. Sci. USA100:7895-7900.
- 50. Polyak, S. J., S. Zheng, and D. G. Harnish. 1995. 5′ termini of Pichinde arenavirus S RNAs and mRNAs contain nontemplated nucleotides. J. Virol.69:3211-3215.
- 51. Raju, R., L. Raju, D. Hacker, D. Garcin, R. Compans, and D. Kolakofsky. 1990. Nontemplated bases at the 5′ ends of Tacaribe virus mRNAs. Virology174:53-59. [[PubMed]
- 52. Ruiz-Jarabo, C. M., C. Ly, E. Domingo, and J. C. de la Torre. 2003. Lethal mutagenesis of the prototypic arenavirus lymphocytic choriomeningitis virus (LCMV). Virology308:37-47. [[PubMed]
- 53. Sänger, C., E. Mühlberger, H. D. Klenk, and S. Becker. 2001. Adverse effects of MVA-T7 on the transport of Marburg virus glycoprotein. J. Virol. Methods91:29-35. [[PubMed]
- 54. Schmitz, H., B. Köhler, T. Laue, C. Drosten, P. J. Veldkamp, S. Günther, P. Emmerich, H. P. Geisen, K. Fleischer, M. F. Beersma, and A. Hoerauf. 2002. Monitoring of clinical and laboratory data in two cases of imported Lassa fever. Microbes Infect.4:43-50. [[PubMed]
- 55. Strecker, T., R. Eichler, J. ter Meulen, W. Weissenhorn, H. D. Klenk, W. Garten, and O. Lenz. 2003. Lassa virus Z protein is a matrix protein sufficient for the release of virus-like particles. J. Virol.77:10700-10705.
- 56. Streeter, D. G., J. T. Witkowski, G. P. Khare, R. W. Sidwell, R. J. Bauer, R. K. Robins, and L. N. Simon. 1973. Mechanism of action of 1-beta-D-ribofuranosyl-1,2,4-triazole-3-carboxamide (Virazole), a new broad-spectrum antiviral agent. Proc. Natl. Acad. Sci. USA70:1174-1178.
- 57. Sutter, G., M. Ohlmann, and V. Erfle. 1995. Non-replicating vaccinia vector efficiently expresses bacteriophage T7 RNA polymerase. FEBS Lett.371:9-12. [[PubMed]
- 58. Vieth, S., A. E. Torda, M. Asper, H. Schmitz, and S. Günther. 2004. Sequence analysis of L RNA of Lassa virus. Virology318:153-168. [[PubMed]
- 59. Weber, F., E. F. Dunn, A. Bridgen, and R. M. Elliott. 2001. The Bunyamwera virus nonstructural protein NSs inhibits viral RNA synthesis in a minireplicon system. Virology281:67-74. [[PubMed]








