Ion selectivity of gram-negative bacterial porins.
Abstract
Twelve different porins from the gram-negative bacteria Escherichia coli, Salmonella typhimurium, Pseudomonas aeruginosa, and Yersinia pestis were reconstituted into lipid bilayer membranes. Most of the porins, except outer membrane protein P, formed large, water-filled, ion-permeable channels with a single-channel conductance between 1.5 and 6 nS in 1 M KCl. The ions used for probing the pore structure had the same relative mobilities while moving through the porin pore as they did while moving in free solution. Thus the single-channel conductances of the individual porins could be used to estimate the effective channel diameters of these porins, yielding values ranging from 1.0 to 2.0 nm. Zero-current potential measurements in the presence of salt gradients across lipid bilayer membranes containing individual porins gave results that were consistent with the conclusions drawn from the single-channel experiments. For all porins except protein P, the channels exhibited a greater cation selectivity for less mobile anions and a greater anion selectivity for less mobile cations, which again indicated that the ions were moving inside the pores in a fashion similar to their movement in the aqueous phase. Three porins, PhoE and NmpC of E. coli and protein P of P. aeruginosa, formed anion-selective pores. PhoE and NmpC were only weakly anion selective, and their selectivity was dependent on the mobility of the ions. In contrast, cations were unable to enter the selectivity filter of the protein P channel. This resulted in a high anion selectivity for all salts tested in this study. The other porins examined, including all of the known constitutive porins of the four gram-negative bacteria studied, were cation selective with a 3- to 40-fold preference for K+ ions over Cl- ions.
Full text
Full text is available as a scanned copy of the original print version. Get a printable copy (PDF file) of the complete article (1.1M), or click on a page image below to browse page by page. Links to PubMed are also available for Selected References.
Selected References
These references are in PubMed. This may not be the complete list of references from this article.
- Benz R, Darveau RP, Hancock RE. Outer-membrane protein PhoE from Escherichia coli forms anion-selective pores in lipid-bilayer membranes. Eur J Biochem. 1984 Apr 16;140(2):319–324. [PubMed] [Google Scholar]
- Benz R, Hancock RE. Properties of the large ion-permeable pores formed from protein F of Pseudomonas aeruginosa in lipid bilayer membranes. Biochim Biophys Acta. 1981 Aug 20;646(2):298–308. [PubMed] [Google Scholar]
- Benz R, Ishii J, Nakae T. Determination of ion permeability through the channels made of porins from the outer membrane of Salmonella typhimurium in lipid bilayer membranes. J Membr Biol. 1980 Aug 21;56(1):19–29. [PubMed] [Google Scholar]
- Benz R, Janko K, Läuger P. Ionic selectivity of pores formed by the matrix protein (porin) of Escherichia coli. Biochim Biophys Acta. 1979 Mar 8;551(2):238–247. [PubMed] [Google Scholar]
- Benz R, Tokunaga H, Nakae T. Properties of chemically modified porin from Escherichia coli in lipid bilayer membranes. Biochim Biophys Acta. 1984 Jan 25;769(2):348–356. [PubMed] [Google Scholar]
- Boehler-Kohler BA, Boos W, Dieterle R, Benz R. Receptor for bacteriophage lambda of Escherichia coli forms larger pores in black lipid membranes than the matrix protein (porin). J Bacteriol. 1979 Apr;138(1):33–39.[PMC free article] [PubMed] [Google Scholar]
- Chen R, Krämer C, Schmidmayr W, Henning U. Primary structure of major outer membrane protein I of Escherichia coli B/r. Proc Natl Acad Sci U S A. 1979 Oct;76(10):5014–5017.[PMC free article] [PubMed] [Google Scholar]
- Darveau RP, Charnetzky WT, Hurlbert RF, Hancock RE. Effects of growth temperature, 47-megadalton plasmid, and calcium deficiency on the outer membrane protein porin and lipopolysaccharide composition of Yersinia pestis EV76. Infect Immun. 1983 Dec;42(3):1092–1101.[PMC free article] [PubMed] [Google Scholar]
- Darveau RP, Hancock RE, Benz R. Chemical modification of the anion selectivity of the PhoE porin from the Escherichia coli outer membrane. Biochim Biophys Acta. 1984 Jul 11;774(1):67–74. [PubMed] [Google Scholar]
- Dorset DL, Engel A, Häner M, Massalski A, Rosenbusch JP. Two-dimensional crystal packing of matrix porin. A channel forming protein in Escherichia coli outer membranes. J Mol Biol. 1983 Apr 25;165(4):701–710. [PubMed] [Google Scholar]
- Dorset DL, Engel A, Massalski A, Rosenbusch JP. Three Dimensional Structure of a Membrane Pore: Electron Microscopical Analysis of Escherichia coli Outer Membrane Matrix Porin. Biophys J. 1984 Jan;45(1):128–129.[PMC free article] [PubMed] [Google Scholar]
- Foulds J, Chai T. Isolation and characterization of isogenic E. coli strains with alterations in the level of one or more major outer membrane proteins. Can J Microbiol. 1979 Mar;25(3):423–427. [PubMed] [Google Scholar]
- Garavito RM, Jenkins J, Jansonius JN, Karlsson R, Rosenbusch JP. X-ray diffraction analysis of matrix porin, an integral membrane protein from Escherichia coli outer membranes. J Mol Biol. 1983 Feb 25;164(2):313–327. [PubMed] [Google Scholar]
- Hancock RE, Decad GM, Nikaido H. Identification of the protein producing transmembrane diffusion pores in the outer membrane of Pseudomonas aeruginosa PA01. Biochim Biophys Acta. 1979 Jul 5;554(2):323–331. [PubMed] [Google Scholar]
- Hancock RE, Poole K, Benz R. Outer membrane protein P of Pseudomonas aeruginosa: regulation by phosphate deficiency and formation of small anion-specific channels in lipid bilayer membranes. J Bacteriol. 1982 May;150(2):730–738.[PMC free article] [PubMed] [Google Scholar]
- Hancock RE, Poole K, Gimple M, Benz R. Modification of the conductance, selectivity and concentration-dependent saturation of Pseudomonas aeruginosa protein P channels by chemical acetylation. Biochim Biophys Acta. 1983 Oct 26;735(1):137–144. [PubMed] [Google Scholar]
- Hindahl MS, Crockford GW, Hancock RE. Outer membrane protein NmpC of Escherichia coli: pore-forming properties in black lipid bilayers. J Bacteriol. 1984 Sep;159(3):1053–1055.[PMC free article] [PubMed] [Google Scholar]
- Inokuchi K, Mutoh N, Matsuyama S, Mizushima S. Primary structure of the ompF gene that codes for a major outer membrane protein of Escherichia coli K-12. Nucleic Acids Res. 1982 Nov 11;10(21):6957–6968.[PMC free article] [PubMed] [Google Scholar]
- Lee DR, Schnaitman CA. Comparison of outer membrane porin proteins produced by Escherichia coli and Salmonella typhimurium. J Bacteriol. 1980 Jun;142(3):1019–1022.[PMC free article] [PubMed] [Google Scholar]
- Lee DR, Schnaitman CA, Pugsley AP. Chemical heterogeneity of major outer membrane pore proteins of Escherichia coli. J Bacteriol. 1979 Jun;138(3):861–870.[PMC free article] [PubMed] [Google Scholar]
- Matsuyama S, Inokuchi K, Mizushima S. Promoter exchange between ompF and ompC, genes for osmoregulated major outer membrane proteins of Escherichia coli K-12. J Bacteriol. 1984 Jun;158(3):1041–1047.[PMC free article] [PubMed] [Google Scholar]
- Mizuno T, Chou MY, Inouye M. A comparative study on the genes for three porins of the Escherichia coli outer membrane. DNA sequence of the osmoregulated ompC gene. J Biol Chem. 1983 Jun 10;258(11):6932–6940. [PubMed] [Google Scholar]
- Nakae T. Outer membrane of Salmonella typhimurium: reconstitution of sucrose-permeable membrane vesicles. Biochem Biophys Res Commun. 1975 Jun 16;64(4):1224–1230. [PubMed] [Google Scholar]
- Nakae T. Identification of the outer membrane protein of E. coli that produces transmembrane channels in reconstituted vesicle membranes. Biochem Biophys Res Commun. 1976 Aug 9;71(3):877–884. [PubMed] [Google Scholar]
- Nakae T, Ishii J. Transmembrane permeability channels in vesicles reconstituted from single species of porins from Salmonella typhimurium. J Bacteriol. 1978 Mar;133(3):1412–1418.[PMC free article] [PubMed] [Google Scholar]
- Nakae T, Ishii JN, Tokunaga H, Kobayashi Y, Nakae R. The solute selectivity of porin pores of Escherichia coli and Salmonella typhimurium. Tokai J Exp Clin Med. 1982;7 (Suppl):141–148. [PubMed] [Google Scholar]
- Nakamura K, Mizushima S. Effects of heating in dodecyl sulfate solution on the conformation and electrophoretic mobility of isolated major outer membrane proteins from Escherichia coli K-12. J Biochem. 1976 Dec;80(6):1411–1422. [PubMed] [Google Scholar]
- Nikaido H, Nakae T. The outer membrane of Gram-negative bacteria. Adv Microb Physiol. 1979;20:163–250. [PubMed] [Google Scholar]
- Nikaido H, Rosenberg EY. Porin channels in Escherichia coli: studies with liposomes reconstituted from purified proteins. J Bacteriol. 1983 Jan;153(1):241–252.[PMC free article] [PubMed] [Google Scholar]
- Overbeeke N, Lugtenberg B. Recognition site for phosphorus-containing compounds and other negatively charged solutes on the PhoE protein pore of the outer membrane of Escherichia coli K12. Eur J Biochem. 1982 Aug;126(1):113–118. [PubMed] [Google Scholar]
- Sato T, Yura T. Chromosomal location and expression of the structural gene for major outer membrane protein Ia of Escherichia coli K-12 and of the homologous gene of Salmonella typhimurium. J Bacteriol. 1979 Aug;139(2):468–477.[PMC free article] [PubMed] [Google Scholar]
- Schindler H, Rosenbusch JP. Matrix protein from Escherichia coli outer membranes forms voltage-controlled channels in lipid bilayers. Proc Natl Acad Sci U S A. 1978 Aug;75(8):3751–3755.[PMC free article] [PubMed] [Google Scholar]
- Sutcliffe J, Blumenthal R, Walter A, Foulds J. Escherichia coli outer membrane protein K is a porin. J Bacteriol. 1983 Nov;156(2):867–872.[PMC free article] [PubMed] [Google Scholar]
- Tokunaga M, Tokunaga H, Okajima Y, Nakae T. Characterization of porins from the outer membrane of Salmonella typhimurium. 2. Physical properties of the functional oligomeric aggregates. Eur J Biochem. 1979 Apr;95(3):441–448. [PubMed] [Google Scholar]
- Tommassen J, Lugtenberg B. Outer membrane protein e of Escherichia coli K-12 is co-regulated with alkaline phosphatase. J Bacteriol. 1980 Jul;143(1):151–157.[PMC free article] [PubMed] [Google Scholar]
- Weckesser J, Zalman LS, Nikaido H. Porin from Rhodopseudomonas sphaeroides. J Bacteriol. 1984 Jul;159(1):199–205.[PMC free article] [PubMed] [Google Scholar]
- Whitfield C, Hancock RE, Costerton JW. Outer membrane protein K of Escherichia coli: purification and pore-forming properties in lipid bilayer membranes. J Bacteriol. 1983 Nov;156(2):873–879.[PMC free article] [PubMed] [Google Scholar]
