Arabidopsis HY8 locus encodes phytochrome A.
Journal: 1993/November - Plant Cell
ISSN: 1040-4651
Abstract:
hy8 long hypocotyl mutants of Arabidopsis defective in responsiveness to prolonged far-red light (the so-called "far-red high-irradiance response") are selectively deficient in functional phytochrome A. To define the molecular lesion in these mutants, we sequenced the phytochrome A gene (phyA) in lines carrying one or other of two classes of hy8 alleles. The hy8-1 and hy8-2 mutants that express no detectable phytochrome A each have a single nucleotide change that inserts a translational stop codon in the protein coding sequence. These results establish that phyA resides at the HY8 locus. The hy8-3 mutant that expresses wild-type levels of photochemically active phytochrome A has a glycine-to-glutamate missense mutation at residue 727 in the C-terminal domain of the phyA sequence. Quantitative fluence rate response analysis showed that the mutant phytochrome A molecule produced by hy8-3 exhibited no detectable regulatory activity above that of the phyA-protein-deficient hy8-2 mutant. This result indicates that glycine-727, which is invariant in all sequenced phytochromes, has a function important to the regulatory activity of phytochrome A but not to photoperception.
Relations:
Content
Citations
(72)
References
(20)
Drugs
(1)
Chemicals
(1)
Genes
(1)
Organisms
(1)
Processes
(5)
Affiliates
(1)
Similar articles
Articles by the same authors
Discussion board
Plant Cell 5(9): 1081-1088

Arabidopsis HY8 locus encodes phytochrome A.

Abstract

hy8 long hypocotyl mutants of Arabidopsis defective in responsiveness to prolonged far-red light (the so-called "far-red high-irradiance response") are selectively deficient in functional phytochrome A. To define the molecular lesion in these mutants, we sequenced the phytochrome A gene (phyA) in lines carrying one or other of two classes of hy8 alleles. The hy8-1 and hy8-2 mutants that express no detectable phytochrome A each have a single nucleotide change that inserts a translational stop codon in the protein coding sequence. These results establish that phyA resides at the HY8 locus. The hy8-3 mutant that expresses wild-type levels of photochemically active phytochrome A has a glycine-to-glutamate missense mutation at residue 727 in the C-terminal domain of the phyA sequence. Quantitative fluence rate response analysis showed that the mutant phytochrome A molecule produced by hy8-3 exhibited no detectable regulatory activity above that of the phyA-protein-deficient hy8-2 mutant. This result indicates that glycine-727, which is invariant in all sequenced phytochromes, has a function important to the regulatory activity of phytochrome A but not to photoperception.

Full Text

The Full Text of this article is available as a PDF (1.3M).

Selected References

These references are in PubMed. This may not be the complete list of references from this article.
  • Beitel GJ, Clark SG, Horvitz HR. Caenorhabditis elegans ras gene let-60 acts as a switch in the pathway of vulval induction. Nature. 1990 Dec 6;348(6301):503–509. [PubMed] [Google Scholar]
  • Chou PY, Fasman GD. Empirical predictions of protein conformation. Annu Rev Biochem. 1978;47:251–276. [PubMed] [Google Scholar]
  • Christensen AH, Quail PH. Structure and expression of a maize phytochrome-encoding gene. Gene. 1989 Dec 28;85(2):381–390. [PubMed] [Google Scholar]
  • Daar IO, Maquat LE. Premature translation termination mediates triosephosphate isomerase mRNA degradation. Mol Cell Biol. 1988 Feb;8(2):802–813.[PMC free article] [PubMed] [Google Scholar]
  • Dehesh K, Tepperman J, Christensen AH, Quail PH. phyB is evolutionarily conserved and constitutively expressed in rice seedling shoots. Mol Gen Genet. 1991 Feb;225(2):305–313. [PubMed] [Google Scholar]
  • Devlin PF, Rood SB, Somers DE, Quail PH, Whitelam GC. Photophysiology of the Elongated Internode (ein) Mutant of Brassica rapa: ein Mutant Lacks a Detectable Phytochrome B-Like Polypeptide. Plant Physiol. 1992 Nov;100(3):1442–1447.[PMC free article] [PubMed] [Google Scholar]
  • Edgerton MD, Jones AM. Localization of protein-protein interactions between subunits of phytochrome. Plant Cell. 1992 Feb;4(2):161–171.[PMC free article] [PubMed] [Google Scholar]
  • Garnier J, Osguthorpe DJ, Robson B. Analysis of the accuracy and implications of simple methods for predicting the secondary structure of globular proteins. J Mol Biol. 1978 Mar 25;120(1):97–120. [PubMed] [Google Scholar]
  • Hanelt S, Braun B, Marx S, Schneider-Poetsch HA. Phytochrome evolution: a phylogenetic tree with the first complete sequence of phytochrome from a cryptogamic plant (Selaginella martensii spring). Photochem Photobiol. 1992 Nov;56(5):751–758. [PubMed] [Google Scholar]
  • Hershey HP, Barker RF, Idler KB, Lissemore JL, Quail PH. Analysis of cloned cDNA and genomic sequences for phytochrome: complete amino acid sequences for two gene products expressed in etiolated Avena. Nucleic Acids Res. 1985 Dec 9;13(23):8543–8559.[PMC free article] [PubMed] [Google Scholar]
  • Jones AM, Erickson HP. Domain structure of phytochrome from Avena sativa visualized by electron microscopy. Photochem Photobiol. 1989 Apr;49(4):479–483. [PubMed] [Google Scholar]
  • Kyte J, Doolittle RF. A simple method for displaying the hydropathic character of a protein. J Mol Biol. 1982 May 5;157(1):105–132. [PubMed] [Google Scholar]
  • López-Juez E, Nagatani A, Tomizawa K, Deak M, Kern R, Kendrick RE, Furuya M. The cucumber long hypocotyl mutant lacks a light-stable PHYB-like phytochrome. Plant Cell. 1992 Mar;4(3):241–251.[PMC free article] [PubMed] [Google Scholar]
  • Parks BM, Quail PH. hy8, a new class of arabidopsis long hypocotyl mutants deficient in functional phytochrome A. Plant Cell. 1993 Jan;5(1):39–48.[PMC free article] [PubMed] [Google Scholar]
  • Quail PH. Phytochrome: a light-activated molecular switch that regulates plant gene expression. Annu Rev Genet. 1991;25:389–409. [PubMed] [Google Scholar]
  • Seeley KA, Byrne DH, Colbert JT. Red Light-Independent Instability of Oat Phytochrome mRNA in Vivo. Plant Cell. 1992 Jan;4(1):29–38.[PMC free article] [PubMed] [Google Scholar]
  • Somers DE, Sharrock RA, Tepperman JM, Quail PH. The hy3 Long Hypocotyl Mutant of Arabidopsis Is Deficient in Phytochrome B. Plant Cell. 1991 Dec;3(12):1263–1274.[PMC free article] [PubMed] [Google Scholar]
  • Thümmler F, Dufner M, Kreisl P, Dittrich P. Molecular cloning of a novel phytochrome gene of the moss Ceratodon purpureus which encodes a putative light-regulated protein kinase. Plant Mol Biol. 1992 Dec;20(6):1003–1017. [PubMed] [Google Scholar]
  • Vancanneyt G, Rosahl S, Willmitzer L. Translatability of a plant-mRNA strongly influences its accumulation in transgenic plants. Nucleic Acids Res. 1990 May 25;18(10):2917–2921.[PMC free article] [PubMed] [Google Scholar]
  • Wagner D, Tepperman JM, Quail PH. Overexpression of Phytochrome B Induces a Short Hypocotyl Phenotype in Transgenic Arabidopsis. Plant Cell. 1991 Dec;3(12):1275–1288.[PMC free article] [PubMed] [Google Scholar]
University of California-Berkeley/U.S. Department of Agriculture, Albany 94710.

Abstract

hy8 long hypocotyl mutants of Arabidopsis defective in responsiveness to prolonged far-red light (the so-called "far-red high-irradiance response") are selectively deficient in functional phytochrome A. To define the molecular lesion in these mutants, we sequenced the phytochrome A gene (phyA) in lines carrying one or other of two classes of hy8 alleles. The hy8-1 and hy8-2 mutants that express no detectable phytochrome A each have a single nucleotide change that inserts a translational stop codon in the protein coding sequence. These results establish that phyA resides at the HY8 locus. The hy8-3 mutant that expresses wild-type levels of photochemically active phytochrome A has a glycine-to-glutamate missense mutation at residue 727 in the C-terminal domain of the phyA sequence. Quantitative fluence rate response analysis showed that the mutant phytochrome A molecule produced by hy8-3 exhibited no detectable regulatory activity above that of the phyA-protein-deficient hy8-2 mutant. This result indicates that glycine-727, which is invariant in all sequenced phytochromes, has a function important to the regulatory activity of phytochrome A but not to photoperception.

Abstract
Full Text
Selected References
Collaboration tool especially designed for Life Science professionals.Drag-and-drop any entity to your messages.