This study investigated allelopathic effects of Solidago canadensis L. on Microcystis aeruginosa. The results showed that S. canadensis L. extracts could significantly inhibit the growth of M. aeruginosa. The inhibition ratios of samples with 0·3 and 0·5 g l(-1) extracts were over 90% after 7 days, and the transmission electron microscopy images showed the damage of M. aeruginosa cells during the incubation. In physiological and biochemical measurements, the membrane permeability and malondialdehyde (MDA) content rapidly increased with the accumulation of reactive oxygen species (ROS), and the content of antioxidant molecules (ascorbic acid (AsA) and glutathione (GSH)) increased. Although the activities of antioxidant enzymes (superoxide dismutase (SOD), peroxidase (POD) and catalase (CAT)) increased at low extracts concentrations, the effects were inhibitory when the extracts concentration increased. In conclusion, this study provided a new idea to utilize the detrimental weed S. canadensis L. to control harmful cyanobacteria. The alterations in physiology and biochemistry of M. aeruginosa cell were not in isolation, but with the stimulation of intracellular ROS that could play a fundamental role in inhibitory effects of S. canadensis L. extracts. It was inferred that terrestrial plants could have the same algistatic mechanisms as hydrophytes.